Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Limk1P53668 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Limk1P53668 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Limk1P53668 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Limk1P53668 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Limk1P53668 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Limk1P53668 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Limk1P53668 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Limk1P53668 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Limk1P53668 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Limk1P53668 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Limk1P53668 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.63■□□□□ 0.89
Limk1P53668 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.63■□□□□ 0.89
Limk1P53668 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Limk1P53668 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.63■□□□□ 0.89
Limk1P53668 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Limk1P53668 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk1P53668 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Limk1P53668 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.62■□□□□ 0.89
Limk1P53668 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk1P53668 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Limk1P53668 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk1P53668 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Limk1P53668 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.61■□□□□ 0.89
Limk1P53668 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Limk1P53668 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.61■□□□□ 0.89
Limk1P53668 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.61■□□□□ 0.89
Limk1P53668 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Limk1P53668 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.61■□□□□ 0.89
Limk1P53668 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.61■□□□□ 0.89
Limk1P53668 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Limk1P53668 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Limk1P53668 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.6■□□□□ 0.89
Limk1P53668 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Limk1P53668 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.6■□□□□ 0.89
Limk1P53668 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Limk1P53668 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
Limk1P53668 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.6■□□□□ 0.89
Limk1P53668 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Limk1P53668 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Limk1P53668 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Limk1P53668 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk1P53668 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Limk1P53668 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk1P53668 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.59■□□□□ 0.89
Limk1P53668 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk1P53668 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk1P53668 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk1P53668 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.59■□□□□ 0.89
Limk1P53668 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Limk1P53668 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Limk1P53668 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Limk1P53668 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Limk1P53668 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.58■□□□□ 0.89
Limk1P53668 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Limk1P53668 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Limk1P53668 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
Limk1P53668 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Limk1P53668 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Limk1P53668 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Limk1P53668 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Limk1P53668 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Limk1P53668 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Limk1P53668 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Limk1P53668 Gm5874-201ENSMUST00000096101 508 ntBASIC20.57■□□□□ 0.88
Limk1P53668 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Limk1P53668 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Limk1P53668 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Limk1P53668 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Limk1P53668 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Limk1P53668 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Limk1P53668 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
Limk1P53668 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Limk1P53668 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Limk1P53668 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Limk1P53668 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Limk1P53668 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.55■□□□□ 0.88
Limk1P53668 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk1P53668 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Limk1P53668 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Limk1P53668 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Limk1P53668 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Limk1P53668 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Limk1P53668 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Limk1P53668 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms