Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.91■□□□□ 0.46
Hmga2P52927 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.91■□□□□ 0.46
Hmga2P52927 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga2P52927 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga2P52927 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga2P52927 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga2P52927 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hmga2P52927 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga2P52927 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga2P52927 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmga2P52927 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga2P52927 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga2P52927 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hmga2P52927 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga2P52927 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmga2P52927 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Hmga2P52927 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hmga2P52927 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.89■□□□□ 0.45
Hmga2P52927 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga2P52927 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Hmga2P52927 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hmga2P52927 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga2P52927 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga2P52927 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga2P52927 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga2P52927 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga2P52927 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Hmga2P52927 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga2P52927 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga2P52927 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga2P52927 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga2P52927 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga2P52927 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga2P52927 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga2P52927 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga2P52927 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Hmga2P52927 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmga2P52927 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmga2P52927 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmga2P52927 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hmga2P52927 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.86■□□□□ 0.45
Hmga2P52927 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga2P52927 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hmga2P52927 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.85■□□□□ 0.45
Hmga2P52927 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.85■□□□□ 0.45
Hmga2P52927 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Hmga2P52927 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hmga2P52927 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga2P52927 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.84■□□□□ 0.45
Hmga2P52927 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hmga2P52927 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.84■□□□□ 0.45
Hmga2P52927 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hmga2P52927 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga2P52927 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga2P52927 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga2P52927 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga2P52927 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga2P52927 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga2P52927 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga2P52927 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.83■□□□□ 0.45
Hmga2P52927 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga2P52927 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga2P52927 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms