Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkn1aP39689 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkn1aP39689 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn1aP39689 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
Cdkn1aP39689 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn1aP39689 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn1aP39689 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Cdkn1aP39689 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn1aP39689 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdkn1aP39689 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn1aP39689 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn1aP39689 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn1aP39689 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdkn1aP39689 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn1aP39689 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn1aP39689 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn1aP39689 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.36■□□□□ 0.37
Cdkn1aP39689 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn1aP39689 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cdkn1aP39689 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn1aP39689 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Cdkn1aP39689 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn1aP39689 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn1aP39689 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn1aP39689 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn1aP39689 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn1aP39689 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn1aP39689 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cdkn1aP39689 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkn1aP39689 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cdkn1aP39689 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkn1aP39689 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkn1aP39689 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkn1aP39689 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkn1aP39689 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkn1aP39689 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdkn1aP39689 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdkn1aP39689 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkn1aP39689 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkn1aP39689 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkn1aP39689 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.29■□□□□ 0.36
Cdkn1aP39689 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkn1aP39689 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cdkn1aP39689 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Cdkn1aP39689 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms