Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.88■□□□□ 0.77
Slc6a11P31650 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a11P31650 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a11P31650 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a11P31650 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.87■□□□□ 0.77
Slc6a11P31650 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a11P31650 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a11P31650 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Slc6a11P31650 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.87■□□□□ 0.77
Slc6a11P31650 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Slc6a11P31650 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a11P31650 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a11P31650 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a11P31650 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a11P31650 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a11P31650 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a11P31650 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Slc6a11P31650 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.85■□□□□ 0.77
Slc6a11P31650 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Slc6a11P31650 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc6a11P31650 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc6a11P31650 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc6a11P31650 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc6a11P31650 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc6a11P31650 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Slc6a11P31650 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.84■□□□□ 0.77
Slc6a11P31650 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Slc6a11P31650 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.84■□□□□ 0.77
Slc6a11P31650 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Slc6a11P31650 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc6a11P31650 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc6a11P31650 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Slc6a11P31650 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Slc6a11P31650 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc6a11P31650 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc6a11P31650 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc6a11P31650 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Slc6a11P31650 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a11P31650 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a11P31650 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a11P31650 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a11P31650 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a11P31650 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a11P31650 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.8■□□□□ 0.76
Slc6a11P31650 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc6a11P31650 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a11P31650 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a11P31650 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc6a11P31650 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a11P31650 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a11P31650 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a11P31650 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Slc6a11P31650 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.79■□□□□ 0.76
Slc6a11P31650 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.79■□□□□ 0.76
Slc6a11P31650 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a11P31650 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a11P31650 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a11P31650 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Slc6a11P31650 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a11P31650 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a11P31650 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a11P31650 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a11P31650 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a11P31650 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a11P31650 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.78■□□□□ 0.76
Slc6a11P31650 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Slc6a11P31650 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a11P31650 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a11P31650 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a11P31650 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc6a11P31650 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.77■□□□□ 0.76
Slc6a11P31650 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc6a11P31650 Gm43566-201ENSMUST00000196851 808 ntBASIC19.77■□□□□ 0.76
Slc6a11P31650 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a11P31650 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a11P31650 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a11P31650 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Slc6a11P31650 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a11P31650 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a11P31650 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc6a11P31650 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a11P31650 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a11P31650 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms