Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a1P31648 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a1P31648 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a1P31648 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Slc6a1P31648 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc6a1P31648 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Slc6a1P31648 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a1P31648 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a1P31648 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a1P31648 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc6a1P31648 Gm4799-201ENSMUST00000095396 657 ntBASIC17.97■□□□□ 0.47
Slc6a1P31648 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a1P31648 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a1P31648 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a1P31648 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a1P31648 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a1P31648 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a1P31648 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a1P31648 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc6a1P31648 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a1P31648 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a1P31648 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.96■□□□□ 0.47
Slc6a1P31648 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a1P31648 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc6a1P31648 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.95■□□□□ 0.46
Slc6a1P31648 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc6a1P31648 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.95■□□□□ 0.46
Slc6a1P31648 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slc6a1P31648 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slc6a1P31648 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a1P31648 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slc6a1P31648 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a1P31648 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a1P31648 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.94■□□□□ 0.46
Slc6a1P31648 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a1P31648 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a1P31648 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a1P31648 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a1P31648 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.94■□□□□ 0.46
Slc6a1P31648 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
Slc6a1P31648 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a1P31648 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.93■□□□□ 0.46
Slc6a1P31648 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a1P31648 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a1P31648 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a1P31648 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a1P31648 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Slc6a1P31648 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a1P31648 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Slc6a1P31648 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a1P31648 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a1P31648 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a1P31648 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Slc6a1P31648 Mir3960-201ENSMUST00000198213 73 ntBASIC17.91■□□□□ 0.46
Slc6a1P31648 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Slc6a1P31648 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a1P31648 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.9■□□□□ 0.46
Slc6a1P31648 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a1P31648 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a1P31648 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a1P31648 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a1P31648 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a1P31648 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a1P31648 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.9■□□□□ 0.46
Slc6a1P31648 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.9■□□□□ 0.46
Slc6a1P31648 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slc6a1P31648 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.89■□□□□ 0.46
Slc6a1P31648 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a1P31648 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a1P31648 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a1P31648 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.89■□□□□ 0.45
Slc6a1P31648 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a1P31648 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a1P31648 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
Slc6a1P31648 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a1P31648 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Slc6a1P31648 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc6a1P31648 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.88■□□□□ 0.45
Slc6a1P31648 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc6a1P31648 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms