Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PrkcdP28867 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PrkcdP28867 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PrkcdP28867 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PrkcdP28867 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
PrkcdP28867 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PrkcdP28867 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PrkcdP28867 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PrkcdP28867 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PrkcdP28867 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PrkcdP28867 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PrkcdP28867 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PrkcdP28867 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PrkcdP28867 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PrkcdP28867 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PrkcdP28867 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.85■□□□□ 0.93
PrkcdP28867 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PrkcdP28867 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.85■□□□□ 0.93
PrkcdP28867 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PrkcdP28867 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PrkcdP28867 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PrkcdP28867 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PrkcdP28867 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PrkcdP28867 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PrkcdP28867 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.84■□□□□ 0.93
PrkcdP28867 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PrkcdP28867 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.84■□□□□ 0.93
PrkcdP28867 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PrkcdP28867 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PrkcdP28867 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PrkcdP28867 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.83■□□□□ 0.93
PrkcdP28867 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.83■□□□□ 0.93
PrkcdP28867 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.83■□□□□ 0.93
PrkcdP28867 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.83■□□□□ 0.93
PrkcdP28867 Gm9806-201ENSMUST00000051080 552 ntBASIC20.83■□□□□ 0.93
PrkcdP28867 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PrkcdP28867 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PrkcdP28867 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PrkcdP28867 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrkcdP28867 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrkcdP28867 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.82■□□□□ 0.92
PrkcdP28867 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PrkcdP28867 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrkcdP28867 Scarna2-201ENSMUST00000157560 414 ntBASIC20.82■□□□□ 0.92
PrkcdP28867 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.82■□□□□ 0.92
PrkcdP28867 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrkcdP28867 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrkcdP28867 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrkcdP28867 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.82■□□□□ 0.92
PrkcdP28867 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PrkcdP28867 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PrkcdP28867 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PrkcdP28867 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PrkcdP28867 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PrkcdP28867 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.8■□□□□ 0.92
PrkcdP28867 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.8■□□□□ 0.92
PrkcdP28867 Gm16437-201ENSMUST00000025669 507 ntBASIC20.8■□□□□ 0.92
PrkcdP28867 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkcdP28867 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PrkcdP28867 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.79■□□□□ 0.92
PrkcdP28867 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PrkcdP28867 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PrkcdP28867 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrkcdP28867 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PrkcdP28867 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PrkcdP28867 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PrkcdP28867 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PrkcdP28867 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PrkcdP28867 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrkcdP28867 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PrkcdP28867 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PrkcdP28867 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PrkcdP28867 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PrkcdP28867 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PrkcdP28867 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PrkcdP28867 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrkcdP28867 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrkcdP28867 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrkcdP28867 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrkcdP28867 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrkcdP28867 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PrkcdP28867 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrkcdP28867 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrkcdP28867 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.75■□□□□ 0.91
PrkcdP28867 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrkcdP28867 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrkcdP28867 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrkcdP28867 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PrkcdP28867 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrkcdP28867 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrkcdP28867 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrkcdP28867 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms