Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40P27512 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40P27512 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40P27512 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Cd40P27512 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40P27512 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40P27512 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.11■□□□□ 0.65
Cd40P27512 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd40P27512 Gm5812-201ENSMUST00000061073 957 ntBASIC19.11■□□□□ 0.65
Cd40P27512 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40P27512 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40P27512 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cd40P27512 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40P27512 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40P27512 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40P27512 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.1■□□□□ 0.65
Cd40P27512 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.1■□□□□ 0.65
Cd40P27512 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40P27512 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.1■□□□□ 0.65
Cd40P27512 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd40P27512 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd40P27512 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.09■□□□□ 0.65
Cd40P27512 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd40P27512 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.09■□□□□ 0.65
Cd40P27512 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd40P27512 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd40P27512 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cd40P27512 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd40P27512 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd40P27512 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd40P27512 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40P27512 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cd40P27512 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40P27512 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.07■□□□□ 0.64
Cd40P27512 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40P27512 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.07■□□□□ 0.64
Cd40P27512 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cd40P27512 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.07■□□□□ 0.64
Cd40P27512 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Cd40P27512 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40P27512 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40P27512 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40P27512 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40P27512 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40P27512 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cd40P27512 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40P27512 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.06■□□□□ 0.64
Cd40P27512 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.06■□□□□ 0.64
Cd40P27512 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.06■□□□□ 0.64
Cd40P27512 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40P27512 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40P27512 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40P27512 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40P27512 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.05■□□□□ 0.64
Cd40P27512 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.05■□□□□ 0.64
Cd40P27512 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40P27512 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40P27512 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40P27512 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40P27512 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40P27512 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40P27512 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40P27512 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40P27512 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.04■□□□□ 0.64
Cd40P27512 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40P27512 Gm10399-202ENSMUST00000202768 748 ntBASIC19.04■□□□□ 0.64
Cd40P27512 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40P27512 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40P27512 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40P27512 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40P27512 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.03■□□□□ 0.64
Cd40P27512 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40P27512 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40P27512 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40P27512 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Cd40P27512 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd40P27512 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cd40P27512 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cd40P27512 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Cd40P27512 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cd40P27512 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cd40P27512 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40P27512 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40P27512 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40P27512 Gm15546-201ENSMUST00000122095 826 ntBASIC19.01■□□□□ 0.63
Cd40P27512 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.01■□□□□ 0.63
Cd40P27512 Gm15820-201ENSMUST00000201566 728 ntBASIC19.01■□□□□ 0.63
Cd40P27512 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40P27512 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40P27512 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40P27512 Gm32051-202ENSMUST00000197905 2385 ntBASIC19■□□□□ 0.63
Cd40P27512 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Cd40P27512 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19■□□□□ 0.63
Cd40P27512 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19■□□□□ 0.63
Cd40P27512 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd40P27512 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19■□□□□ 0.63
Cd40P27512 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd40P27512 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cd40P27512 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40P27512 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms