Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col8a2P25318 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col8a2P25318 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.66■□□□□ 0.42
Col8a2P25318 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.66■□□□□ 0.42
Col8a2P25318 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.66■□□□□ 0.42
Col8a2P25318 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col8a2P25318 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col8a2P25318 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col8a2P25318 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col8a2P25318 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col8a2P25318 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col8a2P25318 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col8a2P25318 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col8a2P25318 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col8a2P25318 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col8a2P25318 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col8a2P25318 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col8a2P25318 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col8a2P25318 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Col8a2P25318 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
Col8a2P25318 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col8a2P25318 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col8a2P25318 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col8a2P25318 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.63■□□□□ 0.41
Col8a2P25318 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col8a2P25318 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col8a2P25318 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col8a2P25318 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.62■□□□□ 0.41
Col8a2P25318 Gm7417-201ENSMUST00000192950 473 ntBASIC17.62■□□□□ 0.41
Col8a2P25318 Gm40881-201ENSMUST00000223397 166 ntBASIC17.62■□□□□ 0.41
Col8a2P25318 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Col8a2P25318 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col8a2P25318 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col8a2P25318 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.61■□□□□ 0.41
Col8a2P25318 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.61■□□□□ 0.41
Col8a2P25318 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col8a2P25318 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col8a2P25318 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col8a2P25318 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.6■□□□□ 0.41
Col8a2P25318 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col8a2P25318 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.6■□□□□ 0.41
Col8a2P25318 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col8a2P25318 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col8a2P25318 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.59■□□□□ 0.41
Col8a2P25318 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col8a2P25318 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col8a2P25318 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col8a2P25318 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col8a2P25318 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.59■□□□□ 0.41
Col8a2P25318 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.59■□□□□ 0.41
Col8a2P25318 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col8a2P25318 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col8a2P25318 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col8a2P25318 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col8a2P25318 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.58■□□□□ 0.41
Col8a2P25318 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col8a2P25318 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.58■□□□□ 0.4
Col8a2P25318 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col8a2P25318 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col8a2P25318 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col8a2P25318 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col8a2P25318 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col8a2P25318 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.58■□□□□ 0.4
Col8a2P25318 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col8a2P25318 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Col8a2P25318 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col8a2P25318 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col8a2P25318 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col8a2P25318 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.57■□□□□ 0.4
Col8a2P25318 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.57■□□□□ 0.4
Col8a2P25318 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col8a2P25318 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col8a2P25318 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col8a2P25318 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col8a2P25318 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col8a2P25318 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col8a2P25318 Gm10399-202ENSMUST00000202768 748 ntBASIC17.56■□□□□ 0.4
Col8a2P25318 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col8a2P25318 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col8a2P25318 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col8a2P25318 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col8a2P25318 Gm22238-201ENSMUST00000175222 88 ntBASIC17.55■□□□□ 0.4
Col8a2P25318 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col8a2P25318 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Col8a2P25318 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col8a2P25318 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms