Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf1bP25119 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf1bP25119 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf1bP25119 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1bP25119 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1bP25119 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1bP25119 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1bP25119 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.43■□□□□ 0.7
Tnfrsf1bP25119 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1bP25119 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Gm10399-202ENSMUST00000202768 748 ntBASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf1bP25119 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf1bP25119 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf1bP25119 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf1bP25119 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf1bP25119 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Tnfrsf1bP25119 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf1bP25119 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf1bP25119 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Tnfrsf1bP25119 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tnfrsf1bP25119 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1bP25119 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.38■□□□□ 0.69
Tnfrsf1bP25119 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms