Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk1P22518 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk1P22518 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clk1P22518 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.4■□□□□ 0.7
Clk1P22518 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.4■□□□□ 0.7
Clk1P22518 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clk1P22518 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk1P22518 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clk1P22518 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clk1P22518 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk1P22518 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Clk1P22518 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk1P22518 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.38■□□□□ 0.69
Clk1P22518 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clk1P22518 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 Gm45444-201ENSMUST00000211394 898 ntBASIC19.38■□□□□ 0.69
Clk1P22518 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.38■□□□□ 0.69
Clk1P22518 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk1P22518 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk1P22518 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Clk1P22518 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clk1P22518 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clk1P22518 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clk1P22518 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk1P22518 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.37■□□□□ 0.69
Clk1P22518 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk1P22518 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk1P22518 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk1P22518 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.36■□□□□ 0.69
Clk1P22518 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk1P22518 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk1P22518 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk1P22518 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clk1P22518 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.35■□□□□ 0.69
Clk1P22518 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clk1P22518 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Clk1P22518 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clk1P22518 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
Clk1P22518 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clk1P22518 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Clk1P22518 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clk1P22518 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Clk1P22518 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.34■□□□□ 0.69
Clk1P22518 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clk1P22518 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clk1P22518 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clk1P22518 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clk1P22518 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clk1P22518 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clk1P22518 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clk1P22518 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Clk1P22518 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Clk1P22518 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clk1P22518 Gm43566-201ENSMUST00000196851 808 ntBASIC19.33■□□□□ 0.68
Clk1P22518 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clk1P22518 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clk1P22518 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Clk1P22518 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clk1P22518 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clk1P22518 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clk1P22518 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clk1P22518 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Clk1P22518 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clk1P22518 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clk1P22518 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clk1P22518 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clk1P22518 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clk1P22518 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.31■□□□□ 0.68
Clk1P22518 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clk1P22518 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clk1P22518 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clk1P22518 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clk1P22518 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clk1P22518 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clk1P22518 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clk1P22518 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.3■□□□□ 0.68
Clk1P22518 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clk1P22518 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clk1P22518 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clk1P22518 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clk1P22518 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clk1P22518 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk1P22518 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.29■□□□□ 0.68
Clk1P22518 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Clk1P22518 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Clk1P22518 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clk1P22518 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.29■□□□□ 0.68
Clk1P22518 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk1P22518 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk1P22518 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk1P22518 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk1P22518 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk1P22518 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk1P22518 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms