Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn1P18608 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn1P18608 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.25■□□□□ 0.67
Hmgn1P18608 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn1P18608 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn1P18608 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn1P18608 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn1P18608 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Hmgn1P18608 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hmgn1P18608 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hmgn1P18608 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn1P18608 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn1P18608 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn1P18608 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.24■□□□□ 0.67
Hmgn1P18608 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn1P18608 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn1P18608 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn1P18608 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn1P18608 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.23■□□□□ 0.67
Hmgn1P18608 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Hmgn1P18608 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn1P18608 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.23■□□□□ 0.67
Hmgn1P18608 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn1P18608 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn1P18608 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hmgn1P18608 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn1P18608 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
Hmgn1P18608 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn1P18608 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn1P18608 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn1P18608 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn1P18608 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Hmgn1P18608 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn1P18608 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn1P18608 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Hmgn1P18608 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Gm6311-201ENSMUST00000073790 878 ntBASIC19.2■□□□□ 0.66
Hmgn1P18608 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.2■□□□□ 0.66
Hmgn1P18608 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.2■□□□□ 0.66
Hmgn1P18608 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn1P18608 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn1P18608 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn1P18608 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmgn1P18608 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn1P18608 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.19■□□□□ 0.66
Hmgn1P18608 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn1P18608 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.19■□□□□ 0.66
Hmgn1P18608 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn1P18608 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hmgn1P18608 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Hmgn1P18608 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Hmgn1P18608 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn1P18608 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn1P18608 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn1P18608 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn1P18608 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.17■□□□□ 0.66
Hmgn1P18608 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.17■□□□□ 0.66
Hmgn1P18608 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn1P18608 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn1P18608 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hmgn1P18608 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hmgn1P18608 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.16■□□□□ 0.66
Hmgn1P18608 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn1P18608 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Hmgn1P18608 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn1P18608 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn1P18608 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hmgn1P18608 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Hmgn1P18608 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.15■□□□□ 0.66
Hmgn1P18608 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.15■□□□□ 0.66
Hmgn1P18608 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.15■□□□□ 0.66
Hmgn1P18608 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn1P18608 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgn1P18608 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgn1P18608 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn1P18608 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms