Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nid1P10493 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nid1P10493 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nid1P10493 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nid1P10493 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nid1P10493 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nid1P10493 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.79■□□□□ 0.76
Nid1P10493 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nid1P10493 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Nid1P10493 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nid1P10493 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nid1P10493 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nid1P10493 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nid1P10493 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nid1P10493 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nid1P10493 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nid1P10493 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nid1P10493 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nid1P10493 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nid1P10493 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nid1P10493 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.77■□□□□ 0.76
Nid1P10493 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nid1P10493 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nid1P10493 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Nid1P10493 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.76■□□□□ 0.75
Nid1P10493 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nid1P10493 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nid1P10493 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nid1P10493 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nid1P10493 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.75■□□□□ 0.75
Nid1P10493 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nid1P10493 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nid1P10493 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nid1P10493 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nid1P10493 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nid1P10493 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nid1P10493 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nid1P10493 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nid1P10493 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.74■□□□□ 0.75
Nid1P10493 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nid1P10493 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nid1P10493 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nid1P10493 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nid1P10493 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nid1P10493 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.73■□□□□ 0.75
Nid1P10493 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nid1P10493 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nid1P10493 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nid1P10493 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nid1P10493 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nid1P10493 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nid1P10493 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nid1P10493 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nid1P10493 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nid1P10493 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.71■□□□□ 0.75
Nid1P10493 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Nid1P10493 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.7■□□□□ 0.74
Nid1P10493 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.7■□□□□ 0.74
Nid1P10493 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nid1P10493 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nid1P10493 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Nid1P10493 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nid1P10493 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nid1P10493 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nid1P10493 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.69■□□□□ 0.74
Nid1P10493 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nid1P10493 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nid1P10493 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nid1P10493 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.69■□□□□ 0.74
Nid1P10493 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nid1P10493 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nid1P10493 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.68■□□□□ 0.74
Nid1P10493 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nid1P10493 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Nid1P10493 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Cap2-205ENSMUST00000225824 1634 ntBASIC19.68■□□□□ 0.74
Nid1P10493 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nid1P10493 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.67■□□□□ 0.74
Nid1P10493 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nid1P10493 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nid1P10493 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms