Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rc3h2P0C090 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h2P0C090 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h2P0C090 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h2P0C090 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Rc3h2P0C090 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.48■■□□□ 1.03
Rc3h2P0C090 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h2P0C090 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h2P0C090 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h2P0C090 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h2P0C090 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.47■■□□□ 1.03
Rc3h2P0C090 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rc3h2P0C090 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h2P0C090 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h2P0C090 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h2P0C090 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rc3h2P0C090 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rc3h2P0C090 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h2P0C090 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Rc3h2P0C090 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.45■■□□□ 1.02
Rc3h2P0C090 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.45■■□□□ 1.02
Rc3h2P0C090 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rc3h2P0C090 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rc3h2P0C090 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h2P0C090 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.44■■□□□ 1.02
Rc3h2P0C090 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h2P0C090 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h2P0C090 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rc3h2P0C090 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.44■■□□□ 1.02
Rc3h2P0C090 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.43■■□□□ 1.02
Rc3h2P0C090 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rc3h2P0C090 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
Rc3h2P0C090 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h2P0C090 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rc3h2P0C090 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rc3h2P0C090 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h2P0C090 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h2P0C090 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h2P0C090 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h2P0C090 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h2P0C090 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h2P0C090 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rc3h2P0C090 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.41■■□□□ 1.02
Rc3h2P0C090 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h2P0C090 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h2P0C090 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h2P0C090 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.4■■□□□ 1.02
Rc3h2P0C090 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h2P0C090 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h2P0C090 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.4■■□□□ 1.02
Rc3h2P0C090 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rc3h2P0C090 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rc3h2P0C090 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Rc3h2P0C090 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rc3h2P0C090 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.39■■□□□ 1.02
Rc3h2P0C090 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rc3h2P0C090 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.39■■□□□ 1.01
Rc3h2P0C090 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.39■■□□□ 1.01
Rc3h2P0C090 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.39■■□□□ 1.01
Rc3h2P0C090 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.39■■□□□ 1.01
Rc3h2P0C090 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rc3h2P0C090 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rc3h2P0C090 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rc3h2P0C090 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h2P0C090 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h2P0C090 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h2P0C090 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h2P0C090 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.38■■□□□ 1.01
Rc3h2P0C090 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.38■■□□□ 1.01
Rc3h2P0C090 Golgb1-201ENSMUST00000023534 498 ntBASIC21.38■■□□□ 1.01
Rc3h2P0C090 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rc3h2P0C090 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h2P0C090 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.37■■□□□ 1.01
Rc3h2P0C090 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h2P0C090 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h2P0C090 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h2P0C090 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.37■■□□□ 1.01
Rc3h2P0C090 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rc3h2P0C090 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h2P0C090 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.36■■□□□ 1.01
Rc3h2P0C090 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.36■■□□□ 1.01
Rc3h2P0C090 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Rc3h2P0C090 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rc3h2P0C090 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rc3h2P0C090 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h2P0C090 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rc3h2P0C090 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h2P0C090 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rc3h2P0C090 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rc3h2P0C090 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms