Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NefmP08553 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NefmP08553 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31.09■■■□□ 2.57
NefmP08553 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
NefmP08553 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NefmP08553 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NefmP08553 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NefmP08553 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
NefmP08553 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
NefmP08553 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NefmP08553 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
NefmP08553 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NefmP08553 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NefmP08553 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NefmP08553 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC31.06■■■□□ 2.56
NefmP08553 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NefmP08553 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC31.06■■■□□ 2.56
NefmP08553 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NefmP08553 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC31.05■■■□□ 2.56
NefmP08553 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NefmP08553 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC31.05■■■□□ 2.56
NefmP08553 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NefmP08553 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NefmP08553 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
NefmP08553 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC31.04■■■□□ 2.56
NefmP08553 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
NefmP08553 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NefmP08553 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.04■■■□□ 2.56
NefmP08553 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
NefmP08553 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
NefmP08553 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC31.04■■■□□ 2.56
NefmP08553 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NefmP08553 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
NefmP08553 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
NefmP08553 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NefmP08553 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
NefmP08553 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
NefmP08553 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NefmP08553 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
NefmP08553 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
NefmP08553 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NefmP08553 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
NefmP08553 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC31■■■□□ 2.55
NefmP08553 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
NefmP08553 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC31■■■□□ 2.55
NefmP08553 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NefmP08553 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NefmP08553 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC30.99■■■□□ 2.55
NefmP08553 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
NefmP08553 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
NefmP08553 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
NefmP08553 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NefmP08553 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
NefmP08553 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
NefmP08553 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NefmP08553 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NefmP08553 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NefmP08553 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC30.96■■■□□ 2.55
NefmP08553 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NefmP08553 Gm5913-201ENSMUST00000119397 1399 ntBASIC30.96■■■□□ 2.55
NefmP08553 AC124392.1-201ENSMUST00000225172 5324 ntBASIC30.96■■■□□ 2.55
NefmP08553 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NefmP08553 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC30.96■■■□□ 2.55
NefmP08553 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
NefmP08553 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NefmP08553 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
NefmP08553 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NefmP08553 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
NefmP08553 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NefmP08553 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NefmP08553 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC30.94■■■□□ 2.54
NefmP08553 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC30.94■■■□□ 2.54
NefmP08553 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NefmP08553 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NefmP08553 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
NefmP08553 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
NefmP08553 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NefmP08553 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
NefmP08553 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
NefmP08553 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NefmP08553 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NefmP08553 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
NefmP08553 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NefmP08553 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NefmP08553 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NefmP08553 AC158990.1-201ENSMUST00000221450 2016 ntBASIC30.92■■■□□ 2.54
NefmP08553 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NefmP08553 AC116713.1-201ENSMUST00000215074 430 ntBASIC30.92■■■□□ 2.54
NefmP08553 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NefmP08553 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NefmP08553 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.92■■■□□ 2.54
NefmP08553 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NefmP08553 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 162.7 ms