Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.54■■□□□ 1.84
Col4a1P02463 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC26.54■■□□□ 1.84
Col4a1P02463 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col4a1P02463 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col4a1P02463 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Col4a1P02463 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col4a1P02463 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC26.52■■□□□ 1.84
Col4a1P02463 Gm12821-201ENSMUST00000120022 600 ntBASIC26.52■■□□□ 1.84
Col4a1P02463 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col4a1P02463 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col4a1P02463 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col4a1P02463 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col4a1P02463 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col4a1P02463 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.5■■□□□ 1.83
Col4a1P02463 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC26.5■■□□□ 1.83
Col4a1P02463 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Col4a1P02463 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col4a1P02463 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC26.5■■□□□ 1.83
Col4a1P02463 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col4a1P02463 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC26.5■■□□□ 1.83
Col4a1P02463 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Col4a1P02463 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col4a1P02463 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Col4a1P02463 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.49■■□□□ 1.83
Col4a1P02463 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col4a1P02463 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC26.49■■□□□ 1.83
Col4a1P02463 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC26.49■■□□□ 1.83
Col4a1P02463 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.49■■□□□ 1.83
Col4a1P02463 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col4a1P02463 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col4a1P02463 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC26.48■■□□□ 1.83
Col4a1P02463 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC26.48■■□□□ 1.83
Col4a1P02463 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Col4a1P02463 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Col4a1P02463 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Col4a1P02463 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Col4a1P02463 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Col4a1P02463 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
Col4a1P02463 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Col4a1P02463 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col4a1P02463 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Col4a1P02463 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC26.47■■□□□ 1.83
Col4a1P02463 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col4a1P02463 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col4a1P02463 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col4a1P02463 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.46■■□□□ 1.83
Col4a1P02463 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col4a1P02463 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Col4a1P02463 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Col4a1P02463 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col4a1P02463 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Col4a1P02463 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col4a1P02463 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col4a1P02463 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Col4a1P02463 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Col4a1P02463 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col4a1P02463 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC26.45■■□□□ 1.82
Col4a1P02463 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Col4a1P02463 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC26.45■■□□□ 1.82
Col4a1P02463 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col4a1P02463 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col4a1P02463 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Col4a1P02463 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col4a1P02463 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Col4a1P02463 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.44■■□□□ 1.82
Col4a1P02463 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Col4a1P02463 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col4a1P02463 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
Col4a1P02463 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col4a1P02463 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.43■■□□□ 1.82
Col4a1P02463 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col4a1P02463 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
Col4a1P02463 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col4a1P02463 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col4a1P02463 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Col4a1P02463 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Col4a1P02463 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.42■■□□□ 1.82
Col4a1P02463 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col4a1P02463 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col4a1P02463 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col4a1P02463 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col4a1P02463 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Col4a1P02463 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Col4a1P02463 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col4a1P02463 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Col4a1P02463 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col4a1P02463 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Col4a1P02463 Gm2011-201ENSMUST00000203124 1263 ntBASIC26.39■■□□□ 1.82
Col4a1P02463 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col4a1P02463 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col4a1P02463 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.81
Col4a1P02463 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Col4a1P02463 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Col4a1P02463 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Col4a1P02463 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col4a1P02463 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.38■■□□□ 1.81
Col4a1P02463 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col4a1P02463 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col4a1P02463 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Col4a1P02463 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms