Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hbb-b1P02088 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hbb-b1P02088 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hbb-b1P02088 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hbb-b1P02088 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hbb-b1P02088 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hbb-b1P02088 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hbb-b1P02088 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hbb-b1P02088 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hbb-b1P02088 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.84□□□□□ -0.03
Hbb-b1P02088 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hbb-b1P02088 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hbb-b1P02088 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Hbb-b1P02088 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hbb-b1P02088 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.83□□□□□ -0.03
Hbb-b1P02088 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hbb-b1P02088 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Hbb-b1P02088 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hbb-b1P02088 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.81□□□□□ -0.04
Hbb-b1P02088 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.8□□□□□ -0.04
Hbb-b1P02088 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.8□□□□□ -0.04
Hbb-b1P02088 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hbb-b1P02088 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hbb-b1P02088 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.79□□□□□ -0.04
Hbb-b1P02088 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.79□□□□□ -0.04
Hbb-b1P02088 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.79□□□□□ -0.04
Hbb-b1P02088 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hbb-b1P02088 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hbb-b1P02088 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hbb-b1P02088 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.77□□□□□ -0.04
Hbb-b1P02088 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.77□□□□□ -0.04
Hbb-b1P02088 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hbb-b1P02088 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hbb-b1P02088 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hbb-b1P02088 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Hbb-b1P02088 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hbb-b1P02088 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.77□□□□□ -0.05
Hbb-b1P02088 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.77□□□□□ -0.05
Hbb-b1P02088 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hbb-b1P02088 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms