Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Syn1O88935 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Syn1O88935 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Syn1O88935 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Syn1O88935 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Syn1O88935 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Syn1O88935 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Syn1O88935 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.88■■□□□ 1.09
Syn1O88935 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.88■■□□□ 1.09
Syn1O88935 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Syn1O88935 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Syn1O88935 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Syn1O88935 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Syn1O88935 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Syn1O88935 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Syn1O88935 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Syn1O88935 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Syn1O88935 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.86■■□□□ 1.09
Syn1O88935 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Syn1O88935 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.86■■□□□ 1.09
Syn1O88935 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Syn1O88935 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.86■■□□□ 1.09
Syn1O88935 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Syn1O88935 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.86■■□□□ 1.09
Syn1O88935 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.86■■□□□ 1.09
Syn1O88935 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Syn1O88935 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Syn1O88935 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Syn1O88935 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Syn1O88935 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.84■■□□□ 1.09
Syn1O88935 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.84■■□□□ 1.09
Syn1O88935 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.84■■□□□ 1.09
Syn1O88935 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Syn1O88935 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Syn1O88935 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Syn1O88935 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Syn1O88935 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Syn1O88935 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Syn1O88935 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Syn1O88935 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Syn1O88935 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Syn1O88935 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
Syn1O88935 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Syn1O88935 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Syn1O88935 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Syn1O88935 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.82■■□□□ 1.08
Syn1O88935 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Syn1O88935 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Syn1O88935 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Syn1O88935 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.81■■□□□ 1.08
Syn1O88935 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Syn1O88935 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Syn1O88935 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Syn1O88935 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Syn1O88935 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Syn1O88935 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.8■■□□□ 1.08
Syn1O88935 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Syn1O88935 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Syn1O88935 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.79■■□□□ 1.08
Syn1O88935 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.79■■□□□ 1.08
Syn1O88935 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.79■■□□□ 1.08
Syn1O88935 Gm37179-201ENSMUST00000194862 823 ntBASIC21.79■■□□□ 1.08
Syn1O88935 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.79■■□□□ 1.08
Syn1O88935 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Syn1O88935 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Syn1O88935 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Syn1O88935 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Syn1O88935 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Syn1O88935 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Syn1O88935 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.78■■□□□ 1.08
Syn1O88935 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Syn1O88935 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Syn1O88935 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Syn1O88935 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Syn1O88935 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Syn1O88935 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Syn1O88935 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Syn1O88935 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Syn1O88935 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Syn1O88935 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.77■■□□□ 1.08
Syn1O88935 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Syn1O88935 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Syn1O88935 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.77■■□□□ 1.07
Syn1O88935 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Syn1O88935 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Syn1O88935 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Syn1O88935 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Syn1O88935 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Syn1O88935 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.76■■□□□ 1.07
Syn1O88935 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Syn1O88935 Gm9870-201ENSMUST00000063874 645 ntBASIC21.76■■□□□ 1.07
Syn1O88935 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Syn1O88935 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.76■■□□□ 1.07
Syn1O88935 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Syn1O88935 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Syn1O88935 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Syn1O88935 Gm42642-201ENSMUST00000200683 355 ntBASIC21.75■■□□□ 1.07
Syn1O88935 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Syn1O88935 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Syn1O88935 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms