Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn1O88704 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn1O88704 Gm13238-201ENSMUST00000117655 780 ntBASIC20.01■□□□□ 0.79
Hcn1O88704 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.01■□□□□ 0.79
Hcn1O88704 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn1O88704 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Hcn1O88704 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn1O88704 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn1O88704 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn1O88704 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn1O88704 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20■□□□□ 0.79
Hcn1O88704 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hcn1O88704 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20■□□□□ 0.79
Hcn1O88704 Gm43566-201ENSMUST00000196851 808 ntBASIC20■□□□□ 0.79
Hcn1O88704 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hcn1O88704 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hcn1O88704 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hcn1O88704 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hcn1O88704 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hcn1O88704 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn1O88704 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn1O88704 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn1O88704 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn1O88704 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn1O88704 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn1O88704 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Hcn1O88704 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.99■□□□□ 0.79
Hcn1O88704 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Hcn1O88704 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn1O88704 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Hcn1O88704 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn1O88704 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn1O88704 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn1O88704 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hcn1O88704 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn1O88704 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn1O88704 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hcn1O88704 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn1O88704 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hcn1O88704 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcn1O88704 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hcn1O88704 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hcn1O88704 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Hcn1O88704 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hcn1O88704 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hcn1O88704 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn1O88704 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hcn1O88704 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hcn1O88704 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.95■□□□□ 0.78
Hcn1O88704 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn1O88704 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn1O88704 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn1O88704 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hcn1O88704 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn1O88704 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn1O88704 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hcn1O88704 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hcn1O88704 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn1O88704 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hcn1O88704 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.94■□□□□ 0.78
Hcn1O88704 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.94■□□□□ 0.78
Hcn1O88704 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.94■□□□□ 0.78
Hcn1O88704 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.94■□□□□ 0.78
Hcn1O88704 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn1O88704 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
Hcn1O88704 Gm5812-201ENSMUST00000061073 957 ntBASIC19.94■□□□□ 0.78
Hcn1O88704 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn1O88704 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn1O88704 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hcn1O88704 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Gm22567-201ENSMUST00000175542 342 ntBASIC19.93■□□□□ 0.78
Hcn1O88704 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.93■□□□□ 0.78
Hcn1O88704 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn1O88704 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Hcn1O88704 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn1O88704 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn1O88704 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hcn1O88704 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.92■□□□□ 0.78
Hcn1O88704 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn1O88704 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn1O88704 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn1O88704 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn1O88704 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn1O88704 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn1O88704 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn1O88704 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn1O88704 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn1O88704 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Hcn1O88704 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn1O88704 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms