Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Per2O54943 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Per2O54943 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Per2O54943 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Per2O54943 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Per2O54943 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Per2O54943 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Per2O54943 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.92■■□□□ 1.1
Per2O54943 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Per2O54943 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Per2O54943 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.92■■□□□ 1.1
Per2O54943 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Per2O54943 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Per2O54943 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.91■■□□□ 1.1
Per2O54943 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Per2O54943 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Per2O54943 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Per2O54943 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per2O54943 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Per2O54943 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Per2O54943 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per2O54943 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Per2O54943 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Per2O54943 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Per2O54943 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Per2O54943 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Per2O54943 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Per2O54943 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Per2O54943 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Per2O54943 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.88■■□□□ 1.09
Per2O54943 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Per2O54943 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.88■■□□□ 1.09
Per2O54943 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Per2O54943 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Per2O54943 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Per2O54943 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Per2O54943 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.87■■□□□ 1.09
Per2O54943 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.87■■□□□ 1.09
Per2O54943 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per2O54943 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per2O54943 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Per2O54943 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per2O54943 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.87■■□□□ 1.09
Per2O54943 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.87■■□□□ 1.09
Per2O54943 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per2O54943 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per2O54943 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per2O54943 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.87■■□□□ 1.09
Per2O54943 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.86■■□□□ 1.09
Per2O54943 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per2O54943 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per2O54943 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.85■■□□□ 1.09
Per2O54943 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per2O54943 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per2O54943 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per2O54943 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.85■■□□□ 1.09
Per2O54943 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Per2O54943 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per2O54943 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.85■■□□□ 1.09
Per2O54943 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Per2O54943 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Per2O54943 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Per2O54943 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per2O54943 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Per2O54943 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.84■■□□□ 1.09
Per2O54943 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Per2O54943 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Per2O54943 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Per2O54943 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Per2O54943 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Per2O54943 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per2O54943 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Per2O54943 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per2O54943 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per2O54943 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per2O54943 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Per2O54943 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Per2O54943 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Per2O54943 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per2O54943 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Per2O54943 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.83■■□□□ 1.09
Per2O54943 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per2O54943 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
Per2O54943 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Per2O54943 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Per2O54943 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Per2O54943 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Per2O54943 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms