Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Matn3O35701 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Matn3O35701 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.04■□□□□ 0.64
Matn3O35701 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Matn3O35701 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Matn3O35701 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Matn3O35701 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.03■□□□□ 0.64
Matn3O35701 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Matn3O35701 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.03■□□□□ 0.64
Matn3O35701 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.03■□□□□ 0.64
Matn3O35701 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Matn3O35701 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Matn3O35701 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Matn3O35701 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Matn3O35701 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Matn3O35701 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Matn3O35701 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Matn3O35701 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Matn3O35701 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Matn3O35701 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Matn3O35701 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Matn3O35701 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Matn3O35701 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Matn3O35701 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Matn3O35701 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Matn3O35701 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Matn3O35701 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Matn3O35701 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.01■□□□□ 0.63
Matn3O35701 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Matn3O35701 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19■□□□□ 0.63
Matn3O35701 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Matn3O35701 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19■□□□□ 0.63
Matn3O35701 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Matn3O35701 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Matn3O35701 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Matn3O35701 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Matn3O35701 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.98■□□□□ 0.63
Matn3O35701 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.98■□□□□ 0.63
Matn3O35701 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Matn3O35701 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Matn3O35701 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Matn3O35701 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.97■□□□□ 0.63
Matn3O35701 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Matn3O35701 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Matn3O35701 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Matn3O35701 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Matn3O35701 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Matn3O35701 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Matn3O35701 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Matn3O35701 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Matn3O35701 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Matn3O35701 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Matn3O35701 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Matn3O35701 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Matn3O35701 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.96■□□□□ 0.63
Matn3O35701 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Matn3O35701 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Matn3O35701 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Matn3O35701 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Matn3O35701 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Matn3O35701 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Matn3O35701 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Matn3O35701 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Matn3O35701 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Matn3O35701 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Matn3O35701 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Matn3O35701 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Matn3O35701 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms