Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.36■□□□□ 0.85
Abca4O35600 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.36■□□□□ 0.85
Abca4O35600 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Abca4O35600 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.36■□□□□ 0.85
Abca4O35600 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.36■□□□□ 0.85
Abca4O35600 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.36■□□□□ 0.85
Abca4O35600 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.36■□□□□ 0.85
Abca4O35600 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abca4O35600 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abca4O35600 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abca4O35600 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abca4O35600 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.35■□□□□ 0.85
Abca4O35600 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.35■□□□□ 0.85
Abca4O35600 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Abca4O35600 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abca4O35600 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abca4O35600 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Abca4O35600 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.35■□□□□ 0.85
Abca4O35600 Gm10602-201ENSMUST00000098239 609 ntBASIC20.35■□□□□ 0.85
Abca4O35600 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.34■□□□□ 0.85
Abca4O35600 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abca4O35600 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.34■□□□□ 0.85
Abca4O35600 Gm10252-201ENSMUST00000209541 832 ntBASIC20.34■□□□□ 0.85
Abca4O35600 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.34■□□□□ 0.85
Abca4O35600 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abca4O35600 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.33■□□□□ 0.85
Abca4O35600 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Abca4O35600 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Abca4O35600 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Abca4O35600 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Abca4O35600 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.32■□□□□ 0.84
Abca4O35600 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abca4O35600 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Abca4O35600 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Abca4O35600 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abca4O35600 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Abca4O35600 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.3■□□□□ 0.84
Abca4O35600 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Abca4O35600 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abca4O35600 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abca4O35600 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.29■□□□□ 0.84
Abca4O35600 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abca4O35600 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Abca4O35600 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Abca4O35600 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Abca4O35600 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abca4O35600 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.28■□□□□ 0.84
Abca4O35600 Gm7977-201ENSMUST00000193787 748 ntBASIC20.28■□□□□ 0.84
Abca4O35600 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abca4O35600 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abca4O35600 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abca4O35600 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Abca4O35600 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Abca4O35600 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abca4O35600 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abca4O35600 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abca4O35600 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abca4O35600 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Abca4O35600 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abca4O35600 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abca4O35600 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Abca4O35600 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Abca4O35600 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abca4O35600 Gm27801-201ENSMUST00000184174 223 ntBASIC20.25■□□□□ 0.83
Abca4O35600 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.25■□□□□ 0.83
Abca4O35600 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.25■□□□□ 0.83
Abca4O35600 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abca4O35600 Gm9870-201ENSMUST00000063874 645 ntBASIC20.25■□□□□ 0.83
Abca4O35600 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Abca4O35600 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abca4O35600 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Abca4O35600 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.24■□□□□ 0.83
Abca4O35600 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.24■□□□□ 0.83
Abca4O35600 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abca4O35600 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abca4O35600 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abca4O35600 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abca4O35600 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abca4O35600 Gm22240-201ENSMUST00000175225 82 ntBASIC20.23■□□□□ 0.83
Abca4O35600 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Abca4O35600 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abca4O35600 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abca4O35600 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Abca4O35600 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abca4O35600 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Abca4O35600 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abca4O35600 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abca4O35600 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Abca4O35600 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.21■□□□□ 0.83
Abca4O35600 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Abca4O35600 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Abca4O35600 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms