Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a6O35544 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slc1a6O35544 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a6O35544 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a6O35544 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a6O35544 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a6O35544 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.71■□□□□ 0.91
Slc1a6O35544 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Gm6311-201ENSMUST00000073790 878 ntBASIC20.71■□□□□ 0.91
Slc1a6O35544 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc1a6O35544 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.71■□□□□ 0.91
Slc1a6O35544 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc1a6O35544 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc1a6O35544 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.7■□□□□ 0.9
Slc1a6O35544 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.7■□□□□ 0.9
Slc1a6O35544 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Slc1a6O35544 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.7■□□□□ 0.9
Slc1a6O35544 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc1a6O35544 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Slc1a6O35544 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc1a6O35544 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc1a6O35544 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Slc1a6O35544 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc1a6O35544 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.69■□□□□ 0.9
Slc1a6O35544 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc1a6O35544 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc1a6O35544 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc1a6O35544 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Slc1a6O35544 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.69■□□□□ 0.9
Slc1a6O35544 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc1a6O35544 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Slc1a6O35544 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc1a6O35544 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Slc1a6O35544 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc1a6O35544 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc1a6O35544 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Slc1a6O35544 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc1a6O35544 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc1a6O35544 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.67■□□□□ 0.9
Slc1a6O35544 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc1a6O35544 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc1a6O35544 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Slc1a6O35544 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slc1a6O35544 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.66■□□□□ 0.9
Slc1a6O35544 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.66■□□□□ 0.9
Slc1a6O35544 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc1a6O35544 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc1a6O35544 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc1a6O35544 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc1a6O35544 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc1a6O35544 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Slc1a6O35544 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Slc1a6O35544 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc1a6O35544 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.65■□□□□ 0.9
Slc1a6O35544 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Slc1a6O35544 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc1a6O35544 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.65■□□□□ 0.9
Slc1a6O35544 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.65■□□□□ 0.9
Slc1a6O35544 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc1a6O35544 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc1a6O35544 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc1a6O35544 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Slc1a6O35544 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc1a6O35544 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc1a6O35544 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc1a6O35544 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc1a6O35544 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc1a6O35544 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc1a6O35544 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Slc1a6O35544 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slc1a6O35544 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Gm9806-201ENSMUST00000051080 552 ntBASIC20.62■□□□□ 0.89
Slc1a6O35544 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc1a6O35544 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slc1a6O35544 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc1a6O35544 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc1a6O35544 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc1a6O35544 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc1a6O35544 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.61■□□□□ 0.89
Slc1a6O35544 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc1a6O35544 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc1a6O35544 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc1a6O35544 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slc1a6O35544 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slc1a6O35544 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms