Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prrt1O35449 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prrt1O35449 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prrt1O35449 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.76■□□□□ 0.43
Prrt1O35449 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prrt1O35449 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prrt1O35449 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.75■□□□□ 0.43
Prrt1O35449 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.75■□□□□ 0.43
Prrt1O35449 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prrt1O35449 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.75■□□□□ 0.43
Prrt1O35449 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.75■□□□□ 0.43
Prrt1O35449 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prrt1O35449 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prrt1O35449 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prrt1O35449 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prrt1O35449 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.74■□□□□ 0.43
Prrt1O35449 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prrt1O35449 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.73■□□□□ 0.43
Prrt1O35449 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prrt1O35449 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prrt1O35449 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.73■□□□□ 0.43
Prrt1O35449 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prrt1O35449 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prrt1O35449 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prrt1O35449 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prrt1O35449 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prrt1O35449 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prrt1O35449 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prrt1O35449 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prrt1O35449 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prrt1O35449 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prrt1O35449 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prrt1O35449 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prrt1O35449 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Prrt1O35449 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prrt1O35449 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prrt1O35449 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Prrt1O35449 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prrt1O35449 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prrt1O35449 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prrt1O35449 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prrt1O35449 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Prrt1O35449 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Prrt1O35449 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prrt1O35449 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prrt1O35449 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prrt1O35449 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.7■□□□□ 0.42
Prrt1O35449 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prrt1O35449 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prrt1O35449 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prrt1O35449 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prrt1O35449 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prrt1O35449 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Prrt1O35449 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Prrt1O35449 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prrt1O35449 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prrt1O35449 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prrt1O35449 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prrt1O35449 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prrt1O35449 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.68■□□□□ 0.42
Prrt1O35449 Mir3960-201ENSMUST00000198213 73 ntBASIC17.68■□□□□ 0.42
Prrt1O35449 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prrt1O35449 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prrt1O35449 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prrt1O35449 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prrt1O35449 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.68■□□□□ 0.42
Prrt1O35449 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.67■□□□□ 0.42
Prrt1O35449 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prrt1O35449 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prrt1O35449 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prrt1O35449 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prrt1O35449 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prrt1O35449 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prrt1O35449 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prrt1O35449 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prrt1O35449 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.66■□□□□ 0.42
Prrt1O35449 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.66■□□□□ 0.42
Prrt1O35449 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prrt1O35449 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prrt1O35449 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.66■□□□□ 0.42
Prrt1O35449 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prrt1O35449 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prrt1O35449 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.65■□□□□ 0.42
Prrt1O35449 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Prrt1O35449 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.65■□□□□ 0.42
Prrt1O35449 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Prrt1O35449 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prrt1O35449 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prrt1O35449 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Prrt1O35449 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prrt1O35449 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.64■□□□□ 0.41
Prrt1O35449 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prrt1O35449 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms