Protein–RNA interactions for Protein: O08792

Ebf2, Transcription factor COE2, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf2O08792 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Ebf2O08792 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ebf2O08792 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
Ebf2O08792 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf2O08792 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ebf2O08792 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf2O08792 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf2O08792 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ebf2O08792 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf2O08792 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ebf2O08792 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf2O08792 Gm15039-201ENSMUST00000118914 875 ntBASIC21.52■■□□□ 1.04
Ebf2O08792 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ebf2O08792 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf2O08792 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ebf2O08792 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ebf2O08792 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf2O08792 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf2O08792 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf2O08792 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Ebf2O08792 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf2O08792 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.51■■□□□ 1.03
Ebf2O08792 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf2O08792 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ebf2O08792 Iqck-206ENSMUST00000208658 2891 ntBASIC21.5■■□□□ 1.03
Ebf2O08792 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ebf2O08792 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ebf2O08792 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ebf2O08792 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ebf2O08792 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ebf2O08792 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ebf2O08792 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ebf2O08792 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ebf2O08792 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Ebf2O08792 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ebf2O08792 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ebf2O08792 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ebf2O08792 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ebf2O08792 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf2O08792 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf2O08792 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf2O08792 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf2O08792 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf2O08792 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.48■■□□□ 1.03
Ebf2O08792 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf2O08792 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ebf2O08792 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ebf2O08792 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.47■■□□□ 1.03
Ebf2O08792 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ebf2O08792 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf2O08792 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf2O08792 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf2O08792 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Ebf2O08792 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf2O08792 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ebf2O08792 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf2O08792 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf2O08792 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.46■■□□□ 1.03
Ebf2O08792 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ebf2O08792 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.46■■□□□ 1.03
Ebf2O08792 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ebf2O08792 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ebf2O08792 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf2O08792 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf2O08792 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ebf2O08792 Etf1-202ENSMUST00000180351 108 ntBASIC21.45■■□□□ 1.02
Ebf2O08792 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf2O08792 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf2O08792 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf2O08792 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ebf2O08792 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Ebf2O08792 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ebf2O08792 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf2O08792 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Ebf2O08792 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ebf2O08792 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf2O08792 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf2O08792 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf2O08792 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ebf2O08792 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ebf2O08792 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ebf2O08792 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ebf2O08792 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.43■■□□□ 1.02
Ebf2O08792 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ebf2O08792 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ebf2O08792 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Ebf2O08792 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.43■■□□□ 1.02
Ebf2O08792 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Ebf2O08792 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf2O08792 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf2O08792 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.42■■□□□ 1.02
Ebf2O08792 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf2O08792 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.42■■□□□ 1.02
Ebf2O08792 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.42■■□□□ 1.02
Ebf2O08792 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ebf2O08792 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf2O08792 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf2O08792 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ebf2O08792 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ebf2O08792 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms