Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3139J3QK78 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Gm3139J3QK78 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.07■□□□□ 0.96
Gm3139J3QK78 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3139J3QK78 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.07■□□□□ 0.96
Gm3139J3QK78 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Gm3139J3QK78 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm3139J3QK78 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Gm3139J3QK78 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.06■□□□□ 0.96
Gm3139J3QK78 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3139J3QK78 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.06■□□□□ 0.96
Gm3139J3QK78 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.06■□□□□ 0.96
Gm3139J3QK78 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3139J3QK78 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3139J3QK78 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3139J3QK78 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.05■□□□□ 0.96
Gm3139J3QK78 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3139J3QK78 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3139J3QK78 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3139J3QK78 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3139J3QK78 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Gm3139J3QK78 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3139J3QK78 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3139J3QK78 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3139J3QK78 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3139J3QK78 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm3139J3QK78 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Gm3139J3QK78 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gm3139J3QK78 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm3139J3QK78 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3139J3QK78 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm3139J3QK78 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21■□□□□ 0.95
Gm3139J3QK78 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3139J3QK78 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3139J3QK78 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm3139J3QK78 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3139J3QK78 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm3139J3QK78 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21■□□□□ 0.95
Gm3139J3QK78 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gm3139J3QK78 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3139J3QK78 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3139J3QK78 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3139J3QK78 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3139J3QK78 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3139J3QK78 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3139J3QK78 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Gm22238-201ENSMUST00000175222 88 ntBASIC20.98■□□□□ 0.95
Gm3139J3QK78 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3139J3QK78 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3139J3QK78 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3139J3QK78 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3139J3QK78 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.97■□□□□ 0.95
Gm3139J3QK78 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3139J3QK78 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3139J3QK78 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.97■□□□□ 0.95
Gm3139J3QK78 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3139J3QK78 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3139J3QK78 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm3139J3QK78 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm3139J3QK78 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gm3139J3QK78 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3139J3QK78 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3139J3QK78 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3139J3QK78 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Gm3139J3QK78 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3139J3QK78 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3139J3QK78 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3139J3QK78 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms