Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc188F6WEU2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc188F6WEU2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Gm18671-201ENSMUST00000214826 683 ntBASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc188F6WEU2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Gm10252-201ENSMUST00000209541 832 ntBASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc188F6WEU2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 AV356131-201ENSMUST00000206201 750 ntBASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc188F6WEU2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc188F6WEU2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc188F6WEU2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc188F6WEU2 Gm10033-202ENSMUST00000211874 928 ntBASIC21.9■■□□□ 1.1
Ccdc188F6WEU2 Gm40848-201ENSMUST00000221998 324 ntBASIC21.9■■□□□ 1.1
Ccdc188F6WEU2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc188F6WEU2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.9■■□□□ 1.1
Ccdc188F6WEU2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.89■■□□□ 1.09
Ccdc188F6WEU2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc188F6WEU2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc188F6WEU2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Ccdc188F6WEU2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc188F6WEU2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc188F6WEU2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc188F6WEU2 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.88■■□□□ 1.09
Ccdc188F6WEU2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc188F6WEU2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc188F6WEU2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Mir7071-201ENSMUST00000184847 69 ntBASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc188F6WEU2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ccdc188F6WEU2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc188F6WEU2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc188F6WEU2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc188F6WEU2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ccdc188F6WEU2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc188F6WEU2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc188F6WEU2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.85■■□□□ 1.09
Ccdc188F6WEU2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc188F6WEU2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Ccdc188F6WEU2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.84■■□□□ 1.09
Ccdc188F6WEU2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc188F6WEU2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
Ccdc188F6WEU2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc188F6WEU2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc188F6WEU2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc188F6WEU2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.83■■□□□ 1.09
Ccdc188F6WEU2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.83■■□□□ 1.09
Ccdc188F6WEU2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc188F6WEU2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Ccdc188F6WEU2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc188F6WEU2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc188F6WEU2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc188F6WEU2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ccdc188F6WEU2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.82■■□□□ 1.08
Ccdc188F6WEU2 Gm10653-202ENSMUST00000139570 835 ntBASIC21.82■■□□□ 1.08
Ccdc188F6WEU2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc188F6WEU2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.82■■□□□ 1.08
Ccdc188F6WEU2 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.82■■□□□ 1.08
Ccdc188F6WEU2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc188F6WEU2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.81■■□□□ 1.08
Ccdc188F6WEU2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc188F6WEU2 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.81■■□□□ 1.08
Ccdc188F6WEU2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.81■■□□□ 1.08
Ccdc188F6WEU2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.81■■□□□ 1.08
Ccdc188F6WEU2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc188F6WEU2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc188F6WEU2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc188F6WEU2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.8■■□□□ 1.08
Ccdc188F6WEU2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc188F6WEU2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms