Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp27D3YV89 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp27D3YV89 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp27D3YV89 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp27D3YV89 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Mmp27D3YV89 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp27D3YV89 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Mmp27D3YV89 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.61■□□□□ 0.41
Mmp27D3YV89 Golph3-202ENSMUST00000226517 2359 ntBASIC17.61■□□□□ 0.41
Mmp27D3YV89 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.61■□□□□ 0.41
Mmp27D3YV89 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp27D3YV89 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.6■□□□□ 0.41
Mmp27D3YV89 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp27D3YV89 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Mmp27D3YV89 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp27D3YV89 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Mmp27D3YV89 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Mmp27D3YV89 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.59■□□□□ 0.41
Mmp27D3YV89 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Mmp27D3YV89 Gm7332-201ENSMUST00000118351 454 ntBASIC17.59■□□□□ 0.41
Mmp27D3YV89 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Mmp27D3YV89 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.58■□□□□ 0.41
Mmp27D3YV89 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Mmp27D3YV89 Gm44428-201ENSMUST00000204474 874 ntBASIC17.58■□□□□ 0.4
Mmp27D3YV89 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp27D3YV89 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp27D3YV89 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mmp27D3YV89 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp27D3YV89 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp27D3YV89 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.57■□□□□ 0.4
Mmp27D3YV89 Gm14523-201ENSMUST00000117260 558 ntBASIC17.57■□□□□ 0.4
Mmp27D3YV89 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp27D3YV89 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.57■□□□□ 0.4
Mmp27D3YV89 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Mmp27D3YV89 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp27D3YV89 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp27D3YV89 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp27D3YV89 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Mmp27D3YV89 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mmp27D3YV89 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mmp27D3YV89 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.55■□□□□ 0.4
Mmp27D3YV89 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp27D3YV89 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mmp27D3YV89 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.55■□□□□ 0.4
Mmp27D3YV89 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp27D3YV89 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp27D3YV89 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp27D3YV89 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp27D3YV89 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp27D3YV89 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp27D3YV89 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp27D3YV89 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.53■□□□□ 0.4
Mmp27D3YV89 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp27D3YV89 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp27D3YV89 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp27D3YV89 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp27D3YV89 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp27D3YV89 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mmp27D3YV89 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp27D3YV89 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp27D3YV89 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp27D3YV89 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp27D3YV89 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp27D3YV89 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp27D3YV89 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp27D3YV89 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms