Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ptchd4B9EKX1 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.83■■□□□ 1.25
Ptchd4B9EKX1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptchd4B9EKX1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptchd4B9EKX1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptchd4B9EKX1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ptchd4B9EKX1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.82■■□□□ 1.24
Ptchd4B9EKX1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptchd4B9EKX1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.82■■□□□ 1.24
Ptchd4B9EKX1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptchd4B9EKX1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptchd4B9EKX1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ptchd4B9EKX1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ptchd4B9EKX1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptchd4B9EKX1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ptchd4B9EKX1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptchd4B9EKX1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptchd4B9EKX1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptchd4B9EKX1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptchd4B9EKX1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.8■■□□□ 1.24
Ptchd4B9EKX1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptchd4B9EKX1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ptchd4B9EKX1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptchd4B9EKX1 Gm12821-201ENSMUST00000120022 600 ntBASIC22.79■■□□□ 1.24
Ptchd4B9EKX1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ptchd4B9EKX1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.79■■□□□ 1.24
Ptchd4B9EKX1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptchd4B9EKX1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.78■■□□□ 1.24
Ptchd4B9EKX1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptchd4B9EKX1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.78■■□□□ 1.24
Ptchd4B9EKX1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ptchd4B9EKX1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
Ptchd4B9EKX1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ptchd4B9EKX1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptchd4B9EKX1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptchd4B9EKX1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.77■■□□□ 1.24
Ptchd4B9EKX1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptchd4B9EKX1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptchd4B9EKX1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptchd4B9EKX1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptchd4B9EKX1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptchd4B9EKX1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.76■■□□□ 1.23
Ptchd4B9EKX1 Gm27454-201ENSMUST00000185090 204 ntBASIC22.76■■□□□ 1.23
Ptchd4B9EKX1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Ptchd4B9EKX1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptchd4B9EKX1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptchd4B9EKX1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
Ptchd4B9EKX1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.75■■□□□ 1.23
Ptchd4B9EKX1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Ptchd4B9EKX1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.75■■□□□ 1.23
Ptchd4B9EKX1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ptchd4B9EKX1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ptchd4B9EKX1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Ptchd4B9EKX1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptchd4B9EKX1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptchd4B9EKX1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Ptchd4B9EKX1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.74■■□□□ 1.23
Ptchd4B9EKX1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.74■■□□□ 1.23
Ptchd4B9EKX1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptchd4B9EKX1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptchd4B9EKX1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptchd4B9EKX1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Ptchd4B9EKX1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.73■■□□□ 1.23
Ptchd4B9EKX1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
Ptchd4B9EKX1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptchd4B9EKX1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.73■■□□□ 1.23
Ptchd4B9EKX1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptchd4B9EKX1 Gm9870-201ENSMUST00000063874 645 ntBASIC22.72■■□□□ 1.23
Ptchd4B9EKX1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.72■■□□□ 1.23
Ptchd4B9EKX1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptchd4B9EKX1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptchd4B9EKX1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.72■■□□□ 1.23
Ptchd4B9EKX1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptchd4B9EKX1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ptchd4B9EKX1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptchd4B9EKX1 Gm45417-201ENSMUST00000209533 758 ntBASIC22.69■■□□□ 1.22
Ptchd4B9EKX1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptchd4B9EKX1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptchd4B9EKX1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ptchd4B9EKX1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.68■■□□□ 1.22
Ptchd4B9EKX1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ptchd4B9EKX1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ptchd4B9EKX1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ptchd4B9EKX1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms