Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubr4A2AN08 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Gm12527-201ENSMUST00000117967 564 ntBASIC11.53□□□□□ -0.56
Ubr4A2AN08 Gm7143-201ENSMUST00000222811 859 ntBASIC11.53□□□□□ -0.56
Ubr4A2AN08 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubr4A2AN08 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ubr4A2AN08 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Ubr4A2AN08 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.52□□□□□ -0.56
Ubr4A2AN08 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC11.52□□□□□ -0.56
Ubr4A2AN08 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ubr4A2AN08 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ubr4A2AN08 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubr4A2AN08 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.52□□□□□ -0.57
Ubr4A2AN08 Gm4419-202ENSMUST00000226239 1431 ntBASIC11.52□□□□□ -0.57
Ubr4A2AN08 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC11.52□□□□□ -0.57
Ubr4A2AN08 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.52□□□□□ -0.57
Ubr4A2AN08 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubr4A2AN08 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.51□□□□□ -0.57
Ubr4A2AN08 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Ubr4A2AN08 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ubr4A2AN08 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Ubr4A2AN08 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Ubr4A2AN08 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ubr4A2AN08 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ubr4A2AN08 Gm8520-201ENSMUST00000186517 868 ntBASIC11.5□□□□□ -0.57
Ubr4A2AN08 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ubr4A2AN08 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ubr4A2AN08 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ubr4A2AN08 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ubr4A2AN08 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.49□□□□□ -0.57
Ubr4A2AN08 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubr4A2AN08 Gm5867-201ENSMUST00000063197 592 ntBASIC11.49□□□□□ -0.57
Ubr4A2AN08 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ubr4A2AN08 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubr4A2AN08 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ubr4A2AN08 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ubr4A2AN08 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.48□□□□□ -0.57
Ubr4A2AN08 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubr4A2AN08 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubr4A2AN08 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubr4A2AN08 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubr4A2AN08 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.48□□□□□ -0.57
Ubr4A2AN08 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubr4A2AN08 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubr4A2AN08 Gm27741-201ENSMUST00000185060 237 ntBASIC11.47□□□□□ -0.57
Ubr4A2AN08 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ubr4A2AN08 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubr4A2AN08 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubr4A2AN08 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubr4A2AN08 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.46□□□□□ -0.57
Ubr4A2AN08 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.46□□□□□ -0.57
Ubr4A2AN08 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubr4A2AN08 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.46□□□□□ -0.57
Ubr4A2AN08 Nsd1-206ENSMUST00000224918 1001 ntBASIC11.46□□□□□ -0.57
Ubr4A2AN08 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Ubr4A2AN08 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubr4A2AN08 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubr4A2AN08 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ubr4A2AN08 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms