Protein–RNA interactions for Protein: A2AM80

Fam43b, Family with sequence similarity 43, member B, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43bA2AM80 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam43bA2AM80 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43bA2AM80 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43bA2AM80 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.4■■□□□ 1.02
Fam43bA2AM80 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.4■■□□□ 1.02
Fam43bA2AM80 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43bA2AM80 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Fam43bA2AM80 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Fam43bA2AM80 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam43bA2AM80 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam43bA2AM80 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Fam43bA2AM80 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.39■■□□□ 1.01
Fam43bA2AM80 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Fam43bA2AM80 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Fam43bA2AM80 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam43bA2AM80 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam43bA2AM80 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam43bA2AM80 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam43bA2AM80 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.38■■□□□ 1.01
Fam43bA2AM80 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam43bA2AM80 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam43bA2AM80 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Fam43bA2AM80 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam43bA2AM80 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam43bA2AM80 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Fam43bA2AM80 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam43bA2AM80 Gm21956-201ENSMUST00000179946 522 ntBASIC21.37■■□□□ 1.01
Fam43bA2AM80 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam43bA2AM80 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam43bA2AM80 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.36■■□□□ 1.01
Fam43bA2AM80 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam43bA2AM80 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam43bA2AM80 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam43bA2AM80 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Fam43bA2AM80 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam43bA2AM80 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam43bA2AM80 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam43bA2AM80 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.35■■□□□ 1.01
Fam43bA2AM80 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam43bA2AM80 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam43bA2AM80 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam43bA2AM80 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Gm9847-201ENSMUST00000052528 599 ntBASIC21.34■■□□□ 1.01
Fam43bA2AM80 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam43bA2AM80 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam43bA2AM80 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam43bA2AM80 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam43bA2AM80 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.33■■□□□ 1.01
Fam43bA2AM80 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.33■■□□□ 1.01
Fam43bA2AM80 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam43bA2AM80 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Fam43bA2AM80 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.33■■□□□ 1
Fam43bA2AM80 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Fam43bA2AM80 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Fam43bA2AM80 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.32■■□□□ 1
Fam43bA2AM80 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.32■■□□□ 1
Fam43bA2AM80 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam43bA2AM80 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam43bA2AM80 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam43bA2AM80 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.31■■□□□ 1
Fam43bA2AM80 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.31■■□□□ 1
Fam43bA2AM80 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43bA2AM80 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Fam43bA2AM80 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.3■■□□□ 1
Fam43bA2AM80 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43bA2AM80 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43bA2AM80 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43bA2AM80 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43bA2AM80 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fam43bA2AM80 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43bA2AM80 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.3■■□□□ 1
Fam43bA2AM80 Gm13241-201ENSMUST00000094493 780 ntBASIC21.3■■□□□ 1
Fam43bA2AM80 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43bA2AM80 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43bA2AM80 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43bA2AM80 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43bA2AM80 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.29■■□□□ 1
Fam43bA2AM80 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.29■■□□□ 1
Fam43bA2AM80 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fam43bA2AM80 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.29■■□□□ 1
Fam43bA2AM80 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms