Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-1A0N8R1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-1A0N8R1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-1A0N8R1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-1A0N8R1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-1A0N8R1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-1A0N8R1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-1A0N8R1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-1A0N8R1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-1A0N8R1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-1A0N8R1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-1A0N8R1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav12-1A0N8R1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-1A0N8R1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-1A0N8R1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav12-1A0N8R1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-1A0N8R1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-1A0N8R1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-1A0N8R1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-1A0N8R1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-1A0N8R1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-1A0N8R1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-1A0N8R1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-1A0N8R1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-1A0N8R1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-1A0N8R1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav12-1A0N8R1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav12-1A0N8R1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-1A0N8R1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-1A0N8R1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-1A0N8R1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-1A0N8R1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12-1A0N8R1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trav12-1A0N8R1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12-1A0N8R1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12-1A0N8R1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12-1A0N8R1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-1A0N8R1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Trav12-1A0N8R1 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.51■□□□□ 0.39
Trav12-1A0N8R1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav12-1A0N8R1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.51■□□□□ 0.39
Trav12-1A0N8R1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-1A0N8R1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-1A0N8R1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav12-1A0N8R1 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.5■□□□□ 0.39
Trav12-1A0N8R1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.5■□□□□ 0.39
Trav12-1A0N8R1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-1A0N8R1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Trav12-1A0N8R1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav12-1A0N8R1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-1A0N8R1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav12-1A0N8R1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav12-1A0N8R1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-1A0N8R1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms