Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc194A0A140LIT1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc194A0A140LIT1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc194A0A140LIT1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc194A0A140LIT1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc194A0A140LIT1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc194A0A140LIT1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc194A0A140LIT1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc194A0A140LIT1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Mir6538-201ENSMUST00000183713 110 ntBASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc194A0A140LIT1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc194A0A140LIT1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc194A0A140LIT1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc194A0A140LIT1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc194A0A140LIT1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc194A0A140LIT1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc194A0A140LIT1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc194A0A140LIT1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ccdc194A0A140LIT1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc194A0A140LIT1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc194A0A140LIT1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc194A0A140LIT1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc194A0A140LIT1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc194A0A140LIT1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc194A0A140LIT1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Ccdc194A0A140LIT1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc194A0A140LIT1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc194A0A140LIT1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc194A0A140LIT1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc194A0A140LIT1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 Gm12366-201ENSMUST00000121722 873 ntBASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 Gm5786-201ENSMUST00000085368 882 ntBASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc194A0A140LIT1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc194A0A140LIT1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.79■□□□□ 0.92
Ccdc194A0A140LIT1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc194A0A140LIT1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc194A0A140LIT1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ccdc194A0A140LIT1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.79■□□□□ 0.92
Ccdc194A0A140LIT1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc194A0A140LIT1 Gm10420-201ENSMUST00000121713 882 ntBASIC20.78■□□□□ 0.92
Ccdc194A0A140LIT1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc194A0A140LIT1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc194A0A140LIT1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc194A0A140LIT1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc194A0A140LIT1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc194A0A140LIT1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc194A0A140LIT1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc194A0A140LIT1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc194A0A140LIT1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc194A0A140LIT1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc194A0A140LIT1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.77■□□□□ 0.91
Ccdc194A0A140LIT1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc194A0A140LIT1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms