Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb8A0A140LI48 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb8A0A140LI48 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb8A0A140LI48 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhgb8A0A140LI48 Iqck-206ENSMUST00000208658 2891 ntBASIC18.83■□□□□ 0.6
Pcdhgb8A0A140LI48 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb8A0A140LI48 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb8A0A140LI48 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb8A0A140LI48 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb8A0A140LI48 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb8A0A140LI48 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb8A0A140LI48 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb8A0A140LI48 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb8A0A140LI48 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb8A0A140LI48 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb8A0A140LI48 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb8A0A140LI48 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb8A0A140LI48 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb8A0A140LI48 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.79■□□□□ 0.6
Pcdhgb8A0A140LI48 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb8A0A140LI48 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb8A0A140LI48 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhgb8A0A140LI48 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.78■□□□□ 0.6
Pcdhgb8A0A140LI48 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb8A0A140LI48 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb8A0A140LI48 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhgb8A0A140LI48 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb8A0A140LI48 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhgb8A0A140LI48 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb8A0A140LI48 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb8A0A140LI48 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhgb8A0A140LI48 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb8A0A140LI48 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Pcdhgb8A0A140LI48 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgb8A0A140LI48 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb8A0A140LI48 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb8A0A140LI48 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb8A0A140LI48 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb8A0A140LI48 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb8A0A140LI48 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb8A0A140LI48 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb8A0A140LI48 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb8A0A140LI48 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb8A0A140LI48 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb8A0A140LI48 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb8A0A140LI48 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb8A0A140LI48 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb8A0A140LI48 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb8A0A140LI48 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Gm5812-201ENSMUST00000061073 957 ntBASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb8A0A140LI48 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb8A0A140LI48 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb8A0A140LI48 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb8A0A140LI48 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhgb8A0A140LI48 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb8A0A140LI48 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb8A0A140LI48 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.72■□□□□ 0.59
Pcdhgb8A0A140LI48 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms