Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gm45102-201ENSMUST00000207427 857 ntBASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gm9959-201ENSMUST00000068277 390 ntBASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.14■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Etf1-202ENSMUST00000180351 108 ntBASIC15.13■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13n-1A0A0G2JEU8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav13n-1A0A0G2JEU8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13n-1A0A0G2JEU8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms