Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav3n-3A0A0G2JEM0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3n-3A0A0G2JEM0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav3n-3A0A0G2JEM0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav3n-3A0A0G2JEM0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.77■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3n-3A0A0G2JEM0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.76■□□□□ 0.11
Trav3n-3A0A0G2JEM0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.76■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gm22567-201ENSMUST00000175542 342 ntBASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Mir3960-201ENSMUST00000198213 73 ntBASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3n-3A0A0G2JEM0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav3n-3A0A0G2JEM0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms