Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-4A0A0B4J1K2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-4A0A0B4J1K2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-4A0A0B4J1K2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Trav9-4A0A0B4J1K2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.77■□□□□ 0.11
Trav9-4A0A0B4J1K2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-4A0A0B4J1K2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-4A0A0B4J1K2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm15820-201ENSMUST00000201566 728 ntBASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trav9-4A0A0B4J1K2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm10232-201ENSMUST00000089221 720 ntBASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav9-4A0A0B4J1K2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm5812-201ENSMUST00000061073 957 ntBASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-4A0A0B4J1K2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav9-4A0A0B4J1K2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-4A0A0B4J1K2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms