Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.74■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.73■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv12-1A0A0B4J1H0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.71■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv12-1A0A0B4J1H0 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.7■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.7■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gm15546-201ENSMUST00000122095 826 ntBASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.68■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv12-1A0A0B4J1H0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv12-1A0A0B4J1H0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.64■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gm15820-201ENSMUST00000201566 728 ntBASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.62■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv12-1A0A0B4J1H0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms