Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv2A0A0B4J1G8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trbv2A0A0B4J1G8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv2A0A0B4J1G8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv2A0A0B4J1G8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv2A0A0B4J1G8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv2A0A0B4J1G8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv2A0A0B4J1G8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv2A0A0B4J1G8 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.64■□□□□ 0.57
Trbv2A0A0B4J1G8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm6311-201ENSMUST00000073790 878 ntBASIC18.64■□□□□ 0.57
Trbv2A0A0B4J1G8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv2A0A0B4J1G8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv2A0A0B4J1G8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.64■□□□□ 0.57
Trbv2A0A0B4J1G8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv2A0A0B4J1G8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trbv2A0A0B4J1G8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv2A0A0B4J1G8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trbv2A0A0B4J1G8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv2A0A0B4J1G8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms