Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-1A0A075B699 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-1A0A075B699 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Gm14523-201ENSMUST00000117260 558 ntBASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav9d-1A0A075B699 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-1A0A075B699 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Gm7332-201ENSMUST00000118351 454 ntBASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-1A0A075B699 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-1A0A075B699 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav9d-1A0A075B699 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-1A0A075B699 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-1A0A075B699 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav9d-1A0A075B699 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav9d-1A0A075B699 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-1A0A075B699 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-1A0A075B699 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav9d-1A0A075B699 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Trav9d-1A0A075B699 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Trav9d-1A0A075B699 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.08■□□□□ 0.17
Trav9d-1A0A075B699 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms