Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.2■□□□□ 0.34
Trav18A0A075B656 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav18A0A075B656 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav18A0A075B656 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav18A0A075B656 Gm7332-201ENSMUST00000118351 454 ntBASIC17.19■□□□□ 0.34
Trav18A0A075B656 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav18A0A075B656 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav18A0A075B656 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav18A0A075B656 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav18A0A075B656 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav18A0A075B656 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav18A0A075B656 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.18■□□□□ 0.34
Trav18A0A075B656 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav18A0A075B656 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav18A0A075B656 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav18A0A075B656 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav18A0A075B656 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.16■□□□□ 0.34
Trav18A0A075B656 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav18A0A075B656 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav18A0A075B656 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trav18A0A075B656 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.14■□□□□ 0.34
Trav18A0A075B656 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav18A0A075B656 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav18A0A075B656 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav18A0A075B656 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Trav18A0A075B656 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav18A0A075B656 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Trav18A0A075B656 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.12■□□□□ 0.33
Trav18A0A075B656 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav18A0A075B656 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav18A0A075B656 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.11■□□□□ 0.33
Trav18A0A075B656 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav18A0A075B656 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav18A0A075B656 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Trav18A0A075B656 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms