Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-3A0A075B648 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-3A0A075B648 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-3A0A075B648 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-3A0A075B648 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav12-3A0A075B648 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-3A0A075B648 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-3A0A075B648 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-3A0A075B648 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-3A0A075B648 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-3A0A075B648 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trav12-3A0A075B648 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12-3A0A075B648 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav12-3A0A075B648 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.33■□□□□ 0.04
Trav12-3A0A075B648 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-3A0A075B648 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-3A0A075B648 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Trav12-3A0A075B648 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-3A0A075B648 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-3A0A075B648 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-3A0A075B648 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-3A0A075B648 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-3A0A075B648 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms