Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.83■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.79■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.78■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Gm9806-201ENSMUST00000051080 552 ntBASIC17.78■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.77■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-1-dv6d-1A0A075B624 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Scarna2-201ENSMUST00000157560 414 ntBASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.75■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.75■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Gm16437-201ENSMUST00000025669 507 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms