Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4n-4A0A075B615 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Golph3-202ENSMUST00000226517 2359 ntBASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4n-4A0A075B615 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4n-4A0A075B615 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4n-4A0A075B615 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4n-4A0A075B615 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4n-4A0A075B615 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4n-4A0A075B615 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4n-4A0A075B615 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav4n-4A0A075B615 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav4n-4A0A075B615 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trav4n-4A0A075B615 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.56□□□□□ -0.08
Trav4n-4A0A075B615 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4n-4A0A075B615 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4n-4A0A075B615 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4n-4A0A075B615 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4n-4A0A075B615 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4n-4A0A075B615 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav4n-4A0A075B615 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4n-4A0A075B615 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4n-4A0A075B615 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4n-4A0A075B615 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav4n-4A0A075B615 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav4n-4A0A075B615 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Trav4n-4A0A075B615 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav4n-4A0A075B615 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav4n-4A0A075B615 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4n-4A0A075B615 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4n-4A0A075B615 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.52□□□□□ -0.09
Trav4n-4A0A075B615 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4n-4A0A075B615 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms