Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-1A0A075B606 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-1A0A075B606 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13d-1A0A075B606 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13d-1A0A075B606 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-1A0A075B606 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.33■□□□□ 0.04
Trav13d-1A0A075B606 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trav13d-1A0A075B606 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-1A0A075B606 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-1A0A075B606 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-1A0A075B606 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-1A0A075B606 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.32■□□□□ 0.04
Trav13d-1A0A075B606 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-1A0A075B606 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav13d-1A0A075B606 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-1A0A075B606 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Gm7417-201ENSMUST00000192950 473 ntBASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-1A0A075B606 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.27■□□□□ 0.04
Trav13d-1A0A075B606 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-1A0A075B606 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-1A0A075B606 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-1A0A075B606 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-1A0A075B606 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-1A0A075B606 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav13d-1A0A075B606 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-1A0A075B606 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav13d-1A0A075B606 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav13d-1A0A075B606 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.27■□□□□ 0.03
Trav13d-1A0A075B606 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-1A0A075B606 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-1A0A075B606 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-1A0A075B606 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms