Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-1A0A075B601 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-1A0A075B601 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-1A0A075B601 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-1A0A075B601 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav9-1A0A075B601 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-1A0A075B601 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-1A0A075B601 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-1A0A075B601 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-1A0A075B601 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-1A0A075B601 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-1A0A075B601 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-1A0A075B601 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-1A0A075B601 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-1A0A075B601 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-1A0A075B601 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-1A0A075B601 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-1A0A075B601 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9-1A0A075B601 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav9-1A0A075B601 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Gm12366-201ENSMUST00000121722 873 ntBASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Gm5786-201ENSMUST00000085368 882 ntBASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-1A0A075B601 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.31■□□□□ 0.2
Trav9-1A0A075B601 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9-1A0A075B601 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Mir6538-201ENSMUST00000183713 110 ntBASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms