Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-54A0A075B5W5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-54A0A075B5W5 Gm5812-201ENSMUST00000061073 957 ntBASIC18.84■□□□□ 0.61
Ighv1-54A0A075B5W5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ighv1-54A0A075B5W5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-54A0A075B5W5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-54A0A075B5W5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-54A0A075B5W5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-54A0A075B5W5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-54A0A075B5W5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-54A0A075B5W5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Ighv1-54A0A075B5W5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.83■□□□□ 0.6
Ighv1-54A0A075B5W5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-54A0A075B5W5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ighv1-54A0A075B5W5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-54A0A075B5W5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-54A0A075B5W5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-54A0A075B5W5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.82■□□□□ 0.6
Ighv1-54A0A075B5W5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-54A0A075B5W5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.82■□□□□ 0.6
Ighv1-54A0A075B5W5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-54A0A075B5W5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-54A0A075B5W5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-54A0A075B5W5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-54A0A075B5W5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-54A0A075B5W5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-54A0A075B5W5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-54A0A075B5W5 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.77■□□□□ 0.6
Ighv1-54A0A075B5W5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-54A0A075B5W5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-54A0A075B5W5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ighv1-54A0A075B5W5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-54A0A075B5W5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-54A0A075B5W5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-54A0A075B5W5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Gm15546-201ENSMUST00000122095 826 ntBASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Gm10399-202ENSMUST00000202768 748 ntBASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-54A0A075B5W5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Gm15820-201ENSMUST00000201566 728 ntBASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms