Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gm12363-201ENSMUST00000122250 668 ntBASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn9Q9Z0S7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn9Q9Z0S7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Gm32025-201ENSMUST00000217960 307 ntBASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn9Q9Z0S7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 175.2 ms