Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClcnkaQ9WUB7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Gm12390-201ENSMUST00000117897 397 ntBASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Gm11637-201ENSMUST00000120601 592 ntBASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClcnkaQ9WUB7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
ClcnkaQ9WUB7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms