Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubd1Q9R1K7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubd1Q9R1K7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.87□□□□□ -0.35
Tubd1Q9R1K7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Gm10076-201ENSMUST00000073238 384 ntBASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubd1Q9R1K7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Olfr284-202ENSMUST00000206647 966 ntBASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubd1Q9R1K7 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubd1Q9R1K7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms