Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gm7488-201ENSMUST00000117148 684 ntBASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gm16202-201ENSMUST00000117532 544 ntBASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gm6458-201ENSMUST00000211573 635 ntBASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.25□□□□□ -0.13
Chaf1aQ9QWF0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Matn2-203ENSMUST00000226766 3252 ntBASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chaf1aQ9QWF0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Gm5687-201ENSMUST00000118252 640 ntBASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Gm2495-201ENSMUST00000191160 466 ntBASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chaf1aQ9QWF0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms